Tuesday, February 21, 2012

If You’re in the Infrared, You’re Dead: Molecular Mechanisms of Predation and Infrared Sensory in Snakes

There are over 3000 snake species that have been identified worldwide, and about 600 of those species are poisonous1. All snakes possess interesting physiological characteristics bearing biologically important questions about snake morphology that continues to promote research about how snakes move, their evolution, how some snakes create and use their venoms, how snakes capture their prey and its relative importance to benefitting human society. In an article published March 2010, Molecular Basis of Infrared Detection by Snakes, by Elana O. Gracheva et. al, Gracheva, she and her team attempt to answer some of these questions by studying how venomous pit vipers are able to use their unique pit sensory system to detect their prey by utilizing infrared radiation.

Most people are aware of simple snake anatomy: they are legless reptiles with scales that literally ‘snake’ their way around. In the article, the authors introduce the reader with information about how pit vipers detect their prey, without intimidating the reader with overly complex concepts or science jargon, peaking the reader’s curiosity as to how snakes are able to detect their prey.

“Snakes possess a unique sensory system for detecting infrared radiation, enabling them to generate a ‘thermal image’ of predators or prey. Infrared signals are initially received by the pit organ, a highly specialized facial structure that is innervated by nerve fibers of the somatosensory system. How this organ detects and transduces infrared signals into nerve impulses is not known.”

Needless to say, the article doesn't fail to bring their audience to a higher concepts and biological understanding to support their research and present their methods for testing the actual molecular mechanisms of the pit organ, building on existing research that pit vipers possess infrared sensory organs that aid in hunting their prey. The authors provide detailed information about trigeminal fibers to clearly explain their reasoning and how it directed their research to focus on transcriptome profiling to identify TRPA1 as a “candidate infrared detector” based on how infrared radiation can be detected and the limited genome information of pit vipers.

TRPAs are transient receptor potential cation channels that are present in human cells and many animal cells, including snakes. In humans, the receptor is primarily responsible for the detection of pain, cold and environmental irritants. In snakes, they detect infrared radiation. The authors compared trigeminal ganglia (TG) and dorsal root ganglia (DRG) anatomy of pit snakes to those of humans and other snakes that lack pit organs, and compared their gene expression profiles, noting that TG fibers in pit snakes are larger while gene expression profiles are fairly similar to those of humans, thus “marked differences in snakes should reflect functional specialization associated with infrared detection.” By using sequencing to compare profiling between TG and DRG, they found that TRPA1 channel in the diamondback rattlesnake was “was enriched 400-fold in TG” and that they lacked transcripts for TRPA1’s in their DRG, supporting their hypothesis that TRPA1 plays a critical role in the function of infrared sensing in the TG. The authors used high resolution imaging to illustrate these findings, enhancing the readers’ understanding and appreciation for the dense information presented. It also leaves the reader wondering if human gene sequences similar to those of TG fibers in pit snakes could be enhanced to give us truly superhuman power. Maybe flashlights would go extinct and our children would gawk at them in museums.

Overall, the authors do a good job of explaining their research and presenting information that supports their hypothesis that TRP channels are responsible for infrared radiation detection in certain snakes species and why infrared radiation detection is not possible in other species with TRP channels. Despite the explanation, I still couldn't stop wondering if human gene sequences similar to those of TG fibers in pit snakes could be enhanced to give us a truly superhuman power. Maybe flashlights would go extinct and our children would gawk at them in museums. After all, the article isn't convincing enough. It doesn't prove TRP channels are solely responsible for the unique infrared radiation ability to capture prey, exactly how it evolved or why it evolved in certain species with TRP channels than others. The research has a lot of potential, and the outcomes and additional research that it could promote were not discussed in the article’s discussion. The only obvious ‘benefits’ of this research that were apparent to me seemed to concern the development of modern warfare and weapons. The article could have offered information on why this research was important and its implications rather than implying that the research was motivated by science not knowing why or how infrared radiation detection functions. Although human curiosity is great, research is expensive, and some of the motives for the research and greater analysis and discussion of its significance would broaden the reader’s understanding and probe the scientific community to continue researching such a fascinating topic that has been relatively dormant for half a century.


Posted by: Karen-Maria Melendez (2)

References:

1) http://apps.who.int/bloodproducts/snakeantivenoms/database/

2) Gracheva, Elena O., Nicolas T. Ingolia, Yvonne M. Kelly, Julio F. Cordero-Morales, Gunther Hollopeter, Alexander T. Chesler, Elda E. Sanchez, John C. Perez, Johnathan S. Weissman, and David Julius. "Molecular Basis of Infrared Detection by Snakes." Nature 464.1006-1011 (2010). http://www.nature.com.silk.library.umass.edu/nature/journal/v464/n7291/full/nature08943.html


Link

The Study of Monkeys and Money

The study of money and people's reactions to economic situations has been studied for ages, be it analyzing market statistics, trying out deals and incentives in stores, or closed lab environments, but who would have thought to see if other animals have the same reactions to money as humans? It turns out that researchers at the Yale-New Haven Hospital have trained a set of Capuchin monkeys to use money to buy things for themselves from the researchers in the lab.

The monkeys reacted similarly to humans in many situations, such as taking a gamble that seemed like a potential gain over a gamble that seemed like a potential loss even though both had the same probability to them. This shows that psychology does play a large role in bargaining, whether the terms are favorable or not. The monkeys also understood give and take in some situations, trading one food for another, and that if the price of one food dropped that they should buy more of it rather than waste money on more expensive options.

One of the main differences was that the monkeys seemed incapable of saving money, focusing more on instant gratification rather than long-term potential profits. They also stole fairly often from the researchers and from one another. This could give some insight into monkey behavior as well as how humans may react on a base level to situations. Maybe the urges that the monkeys act on are the urges that we all have to suppress because society doesn't allow us to act on them. There is definitely more research to be done in this area and this is a unique and interesting way of pushing it forward.

Article:

Posted by Mike Selden (C)

Insomniac Flies

Sleep is a not a very well understood physiological process. During the day we are awake and active, but at night we become lethargic and groggy until eventually we fall asleep and the cycle repeats itself. This would lead you, and pretty much everyone else, to believe that sleep is controlled via pathways pertaining to the circadian clock. While this definitely appears to be a large part of what makes us sleep, apparently, it’s not the only part.

Researchers at Rockefeller University claim to have found a gene responsible for sleep in fruit flies. Through infrared technology, researchers were able to see when flies were sleeping and use this information to find sleep-deprived mutants. Comparison between normal-sleeping flies and sleep-deprived flies revealed a gene that may be responsible for this anomaly. This gene, called insomniac, was found to have a profound effect on the amount of time spent sleeping per day. Flies lacking the gene slept for 317 minutes a day compared to the average 927 minutes a day.

This might not seem particularly interesting, but the researchers also believe that insomniac is controlled by a homeostatic pathway, specifically a protein degradation pathway. What this means is that this gene affects the body regardless of the time of day, unlike in circadian mechanisms. Without this gene flies lived only two-thirds as long as their normal counterparts.

Article: http://www.sciencedaily.com/releases/2012/02/120220211013.htm

Posted by Michael Thomas (3)